Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hormad1One cut domain family member. (451 aa)    
Predicted Functional Partners:
orc3
Origin recognition complex, subunit 3.
    
   0.621
lhx1
LIM homeobox 1a.
   
 
 0.554
atoh7
Atonal bHLH transcription factor 7.
      
 0.523
LOC113035572
Neurogenin 3.
    
 0.517
VSX2
Visual system homeobox 2.
      
 0.505
ENSACLP00000008361
MAD2 mitotic arrest deficient-like 1 (yeast).
    
   0.492
ENSACLP00000008418
MAD2 mitotic arrest deficient-like 1 (yeast).
    
   0.492
neurod1
Neurogenic differentiation factor.
   
 
 0.473
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.471
WDR7
WD repeat domain 7.
      
 0.470
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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