Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113023211CCCTC-binding factor (zinc finger protein). (746 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes protein.
   
 
 0.876
rad21
RAD21 cohesin complex component a.
   
 
 0.873
ENSACLP00000022919
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 
 0.861
suz12
SUZ12 polycomb repressive complex 2 subunit b.
   
 0.849
LOC113020216
VEFS-Box domain-containing protein.
   
 0.849
ENSACLP00000041460
Ribosomal protein L31.
    
   0.792
ENSACLP00000012279
Nucleophosmin 1a.
    
 
 0.779
ENSACLP00000020322
Nucleophosmin 1b.
    
 
 0.779
pum3
Pumilio RNA-binding family member 3.
    
   0.769
LOC113034576
Ribosomal protein L26.
    
   0.763
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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