Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hormad1-2HORMA domain containing 1. (348 aa)    
Predicted Functional Partners:
trip13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
   
 
 0.931
dmc1
Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily.
   
 
 0.896
LOC113013471
RAD51 paralog C.
   
 
 0.725
knl1
Knl1_RWD_C domain-containing protein.
   
 
 0.725
LOC113029849
REC8 meiotic recombination protein b.
   
 
 0.710
rec114
REC114 meiotic recombination protein.
      
 0.695
ENSACLP00000025040
Uncharacterized protein.
      
 0.693
mcm9
Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family.
    
 
 0.690
sycp3
Synaptonemal complex protein 3.
   
  
 0.689
syce3
Zgc:194246.
      
 0.662
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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