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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113024500Beta-1,3-N-acetylglucosaminyltransferase. (356 aa)    
Predicted Functional Partners:
LOC113020561
Notch receptor 3.
    
  0.882
LOC113016878
Notch receptor 2.
    
  0.882
ENSACLP00000003772
Uncharacterized protein.
    
  0.856
nelfb
Negative elongation factor complex member B.
   
 0.845
ENSACLP00000031548
Notch receptor 1b.
    
  0.843
LOC113025559
Notch receptor 1a.
    
  0.843
LOC113024651
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
  
  
 
0.822
LOC113020456
Beta-1,3-N-acetylglucosaminyltransferase.
  
  
 
0.818
polr2h
Info polymerase (RNA) II (DNA directed) polypeptide H.
    
  0.791
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
    
 0.764
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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