ENSACLP00000006493 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000006493

Uncharacterized protein. (717 aa)

Predicted Functional Partners:

LOC113036502

0.990

TGFB3

0.970

LOC113011971

0.970

ENSACLP00000011103

0.888

LOC113007307

0.888

nrros

0.887

LOC113031004

0.872

itgb8

0.767

ENSACLP00000006472

0.749

ENSACLP00000010593

0.749

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000006472	ENSACLP00000006493	ENSACLP00000006472	ENSACLP00000006493	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Uncharacterized protein.	0.749
ENSACLP00000006472	ENSACLP00000010593	ENSACLP00000006472	ENSACLP00000010593	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.545
ENSACLP00000006472	ENSACLP00000011103	ENSACLP00000006472	ENSACLP00000011103	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.827
ENSACLP00000006472	LOC113007307	ENSACLP00000006472	ENSACLP00000026092	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.827
ENSACLP00000006472	LOC113011971	ENSACLP00000006472	ENSACLP00000036262	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.860
ENSACLP00000006472	LOC113031004	ENSACLP00000006472	ENSACLP00000034603	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Leucine rich repeat containing 32.	0.822
ENSACLP00000006472	LOC113036502	ENSACLP00000006472	ENSACLP00000028286	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.861
ENSACLP00000006472	TGFB3	ENSACLP00000006472	ENSACLP00000018763	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.822
ENSACLP00000006472	nrros	ENSACLP00000006472	ENSACLP00000020933	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Negative regulator of reactive oxygen species.	0.822
ENSACLP00000006493	ENSACLP00000006472	ENSACLP00000006493	ENSACLP00000006472	Uncharacterized protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.749
ENSACLP00000006493	ENSACLP00000010593	ENSACLP00000006493	ENSACLP00000010593	Uncharacterized protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.749
ENSACLP00000006493	ENSACLP00000011103	ENSACLP00000006493	ENSACLP00000011103	Uncharacterized protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.888
ENSACLP00000006493	LOC113007307	ENSACLP00000006493	ENSACLP00000026092	Uncharacterized protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.888
ENSACLP00000006493	LOC113011971	ENSACLP00000006493	ENSACLP00000036262	Uncharacterized protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.970
ENSACLP00000006493	LOC113031004	ENSACLP00000006493	ENSACLP00000034603	Uncharacterized protein.	Leucine rich repeat containing 32.	0.872
ENSACLP00000006493	LOC113036502	ENSACLP00000006493	ENSACLP00000028286	Uncharacterized protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.990
ENSACLP00000006493	TGFB3	ENSACLP00000006493	ENSACLP00000018763	Uncharacterized protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.970
ENSACLP00000006493	itgb8	ENSACLP00000006493	ENSACLP00000032789	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.767
ENSACLP00000006493	nrros	ENSACLP00000006493	ENSACLP00000020933	Uncharacterized protein.	Negative regulator of reactive oxygen species.	0.887
ENSACLP00000010593	ENSACLP00000006472	ENSACLP00000010593	ENSACLP00000006472	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.545