Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006506Coiled-coil domain containing 136b. (406 aa)    
Predicted Functional Partners:
ZNF385D
Zinc finger protein 385D.
    
 
 0.569
spata17
Spermatogenesis associated 17.
   
 0.567
dnaaf4
Dynein axonemal assembly factor 4.
   
 0.551
LOC113015754
TRAF3 interacting protein 2-like.
  
 
  0.526
ENSACLP00000030841
Uncharacterized protein.
      
 0.513
gngt2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.503
traf7
TNF receptor-associated factor 7.
    
  0.474
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.471
cep63
Centrosomal protein 63.
    
 
 0.465
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  0.453
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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