STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006511Battenin. (378 aa)    
Predicted Functional Partners:
ENSACLP00000039878
CLN5 intracellular trafficking protein.
    
 
 0.595
ppt1
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
    
 
 0.550
sbds
SBDS ribosome maturation factor.
    
 
 0.541
mfsd8
Major facilitator superfamily domain containing 8.
    
 
 0.526
ENSACLP00000001200
Hook microtubule-tethering protein 2.
    
 
 0.503
cln8
CLN8 transmembrane ER and ERGIC protein.
      
 0.476
tpp1
Tripeptidyl peptidase I.
      
 0.429
ctns
Cystinosin, lysosomal cystine transporter.
   
  
 0.407
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.