Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006519Gem (nuclear organelle) associated protein 6. (169 aa)    
Predicted Functional Partners:
gemin4
Gem (nuclear organelle) associated protein 4.
   
 0.998
ENSACLP00000025206
Gem (nuclear organelle) associated protein 7.
   
 0.998
ddx20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.
   
 0.996
strap
Serine/threonine kinase receptor associated protein.
    
 0.993
gemin5
Gem (nuclear organelle) associated protein 5.
    
 0.993
ENSACLP00000036553
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.978
ENSACLP00000023721
Small nuclear ribonucleoprotein polypeptide F.
    
  0.972
ENSACLP00000010695
Survival of motor neuron 1, telomeric.
    
 0.963
snrpg
Small nuclear ribonucleoprotein G.
   
  0.938
snrpb
Small nuclear ribonucleoprotein-associated protein.
    
 0.934
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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