STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006521annotation not available (340 aa)    
Predicted Functional Partners:
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  0.578
traf7
TNF receptor-associated factor 7.
    
  0.568
ENSACLP00000018312
Baculoviral IAP repeat containing 6.
   
  0.567
ENSACLP00000024264
Enoyl-CoA delta isomerase 2.
    
  0.538
gak
Cyclin G associated kinase.
   
  0.536
pla2g4a
Phospholipase A2.
    
  0.530
grb2
Growth factor receptor-bound protein 2b.
   
 0.505
ENSACLP00000017156
WD repeat domain 90.
    
  0.491
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.487
ENSACLP00000035637
UBX domain-containing protein 7.
    
  0.484
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.