Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
poc5POC5 centriolar protein homolog (Chlamydomonas). (574 aa)    
Predicted Functional Partners:
cetn3
Centrin 3.
    
 
 0.993
LOC113035244
Centrin, EF-hand protein, 2.
    
 
 0.945
LOC113031395
Centrin 4.
    
 
 0.945
ENSACLP00000036924
Centrosomal protein 120.
   
 
 0.784
ENSACLP00000036883
NOP58 ribonucleoprotein homolog (yeast).
    
   0.782
crppa
CDP-L-ribitol pyrophosphorylase A.
    
 
 0.751
ENSACLP00000017156
WD repeat domain 90.
    
 
 0.748
spice1
Spindle and centriole associated protein 1.
   
  
 0.741
cep63
Centrosomal protein 63.
    
 
 0.720
ENSACLP00000013472
Centrosomal protein 76.
      
 0.712
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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