ENSACLP00000006556 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000006556

G protein-coupled receptor 156. (814 aa)

Predicted Functional Partners:

gabbr2

0.851

LOC113031638

0.831

ENSACLP00000021971

0.831

LOC113036379

0.800

gpsm2

0.672

gnb5

0.642

GNB5

0.642

ENSACLP00000020432

0.620

LOC113022298

0.620

LOC113015060

0.620

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000006556	ENSACLP00000020432	ENSACLP00000006556	ENSACLP00000020432	G protein-coupled receptor 156.	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	0.620
ENSACLP00000006556	ENSACLP00000021971	ENSACLP00000006556	ENSACLP00000021971	G protein-coupled receptor 156.	Gamma-aminobutyric acid (GABA) B receptor, 1b.	0.831
ENSACLP00000006556	GNB5	ENSACLP00000006556	ENSACLP00000021270	G protein-coupled receptor 156.	Guanine nucleotide binding protein (G protein), beta 5b.	0.642
ENSACLP00000006556	LOC113015060	ENSACLP00000006556	ENSACLP00000022798	G protein-coupled receptor 156.	Guanine nucleotide binding protein (G protein), beta polypeptide 3b.	0.620
ENSACLP00000006556	LOC113022298	ENSACLP00000006556	ENSACLP00000020590	G protein-coupled receptor 156.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.620
ENSACLP00000006556	LOC113031638	ENSACLP00000006556	ENSACLP00000015869	G protein-coupled receptor 156.	Gamma-aminobutyric acid (GABA) B receptor, 1a.	0.831
ENSACLP00000006556	LOC113036379	ENSACLP00000006556	ENSACLP00000015908	G protein-coupled receptor 156.	Somatostatin.	0.800
ENSACLP00000006556	gabbr2	ENSACLP00000006556	ENSACLP00000029823	G protein-coupled receptor 156.	Gamma-aminobutyric acid (GABA) B receptor, 2.	0.851
ENSACLP00000006556	gnb5	ENSACLP00000006556	ENSACLP00000011915	G protein-coupled receptor 156.	Guanine nucleotide binding protein (G protein), beta 5a.	0.642
ENSACLP00000006556	gpsm2	ENSACLP00000006556	ENSACLP00000002029	G protein-coupled receptor 156.	Uncharacterized protein.	0.672
ENSACLP00000020432	ENSACLP00000006556	ENSACLP00000020432	ENSACLP00000006556	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	G protein-coupled receptor 156.	0.620
ENSACLP00000020432	ENSACLP00000021971	ENSACLP00000020432	ENSACLP00000021971	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Gamma-aminobutyric acid (GABA) B receptor, 1b.	0.673
ENSACLP00000020432	GNB5	ENSACLP00000020432	ENSACLP00000021270	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Guanine nucleotide binding protein (G protein), beta 5b.	0.627
ENSACLP00000020432	LOC113031638	ENSACLP00000020432	ENSACLP00000015869	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Gamma-aminobutyric acid (GABA) B receptor, 1a.	0.673
ENSACLP00000020432	LOC113036379	ENSACLP00000020432	ENSACLP00000015908	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Somatostatin.	0.482
ENSACLP00000020432	gabbr2	ENSACLP00000020432	ENSACLP00000029823	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Gamma-aminobutyric acid (GABA) B receptor, 2.	0.673
ENSACLP00000020432	gnb5	ENSACLP00000020432	ENSACLP00000011915	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Guanine nucleotide binding protein (G protein), beta 5a.	0.626
ENSACLP00000020432	gpsm2	ENSACLP00000020432	ENSACLP00000002029	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	Uncharacterized protein.	0.507
ENSACLP00000021971	ENSACLP00000006556	ENSACLP00000021971	ENSACLP00000006556	Gamma-aminobutyric acid (GABA) B receptor, 1b.	G protein-coupled receptor 156.	0.831
ENSACLP00000021971	ENSACLP00000020432	ENSACLP00000021971	ENSACLP00000020432	Gamma-aminobutyric acid (GABA) B receptor, 1b.	Guanine nucleotide binding protein (G protein), beta polypeptide 2.	0.673