tradd protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

tradd

Tnfrsf1a-associated via death domain. (330 aa)

Predicted Functional Partners:

ripk1

0.996

LOC113032516

0.996

LOC113031642

0.988

LOC113025693

0.986

LOC113033094

0.982

mib2

0.982

LOC113030168

0.982

LOC113025455

0.982

birc7

0.974

ENSACLP00000035383

0.972

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000035383	LOC113025455	ENSACLP00000035383	ENSACLP00000039377	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.907
ENSACLP00000035383	LOC113025693	ENSACLP00000035383	ENSACLP00000017638	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.919
ENSACLP00000035383	LOC113030168	ENSACLP00000035383	ENSACLP00000031528	Uncharacterized protein.	Baculoviral IAP repeat containing 2.	0.917
ENSACLP00000035383	LOC113031642	ENSACLP00000035383	ENSACLP00000015585	Uncharacterized protein.	Tumor necrosis factor b (TNF superfamily, member 2).	0.976
ENSACLP00000035383	LOC113032516	ENSACLP00000035383	ENSACLP00000035841	Uncharacterized protein.	Tumor necrosis factor receptor superfamily, member 1a.	0.871
ENSACLP00000035383	LOC113033094	ENSACLP00000035383	ENSACLP00000009840	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.907
ENSACLP00000035383	birc7	ENSACLP00000035383	ENSACLP00000037756	Uncharacterized protein.	Baculoviral IAP repeat containing 7.	0.891
ENSACLP00000035383	mib2	ENSACLP00000035383	ENSACLP00000023414	Uncharacterized protein.	Mindbomb E3 ubiquitin protein ligase 2.	0.526
ENSACLP00000035383	ripk1	ENSACLP00000035383	ENSACLP00000030354	Uncharacterized protein.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.972
ENSACLP00000035383	tradd	ENSACLP00000035383	ENSACLP00000006563	Uncharacterized protein.	Tnfrsf1a-associated via death domain.	0.972
LOC113025455	ENSACLP00000035383	ENSACLP00000039377	ENSACLP00000035383	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Uncharacterized protein.	0.907
LOC113025455	LOC113025693	ENSACLP00000039377	ENSACLP00000017638	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.829
LOC113025455	LOC113030168	ENSACLP00000039377	ENSACLP00000031528	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Baculoviral IAP repeat containing 2.	0.940
LOC113025455	LOC113031642	ENSACLP00000039377	ENSACLP00000015585	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Tumor necrosis factor b (TNF superfamily, member 2).	0.917
LOC113025455	LOC113032516	ENSACLP00000039377	ENSACLP00000035841	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Tumor necrosis factor receptor superfamily, member 1a.	0.980
LOC113025455	LOC113033094	ENSACLP00000039377	ENSACLP00000009840	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.816
LOC113025455	birc7	ENSACLP00000039377	ENSACLP00000037756	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Baculoviral IAP repeat containing 7.	0.882
LOC113025455	mib2	ENSACLP00000039377	ENSACLP00000023414	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Mindbomb E3 ubiquitin protein ligase 2.	0.849
LOC113025455	ripk1	ENSACLP00000039377	ENSACLP00000030354	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.956
LOC113025455	tradd	ENSACLP00000039377	ENSACLP00000006563	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Tnfrsf1a-associated via death domain.	0.982