Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrrc19Uncharacterized protein. (355 aa)    
Predicted Functional Partners:
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.839
kbtbd8
Kelch repeat and BTB (POZ) domain containing 8.
      
 0.749
tmem214
Transmembrane protein 214.
      
 0.731
trmt11
tRNA methyltransferase 11 homolog.
      
 0.724
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.714
LOC113008348
Kelch repeat and BTB (POZ) domain containing 7.
      
 0.671
immp2l
Mitochondrial inner membrane protease subunit.
      
 0.655
LOC113010089
Vav 3 guanine nucleotide exchange factor b.
    
  0.572
ntng1
Netrin g1a.
    
  0.572
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.548
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.