Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDHR1Cadherin related family member 1. (822 aa)    
Predicted Functional Partners:
ENSACLP00000001125
Four-jointed box kinase 1.
   
 0.744
LOC113021483
Uncharacterized protein.
    
 0.707
LOC113023765
Junction plakoglobin a.
    
 0.707
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.707
LOC113014539
Uncharacterized protein.
    
 0.707
ENSACLP00000003449
Catenin (cadherin-associated protein), alpha 1.
    
 0.665
ctnna2
Catenin (cadherin-associated protein), alpha 2.
    
 0.665
LOC113035484
Uncharacterized protein.
    
 0.665
ENSACLP00000005618
Usher syndrome 1C.
   
 
 0.656
ttc8
Tetratricopeptide repeat domain 8.
    
 
 0.655
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.