Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113033571Doublesex and mab-3 related transcription factor 1. (292 aa)    
Predicted Functional Partners:
ENSACLP00000033904
Anti-Mullerian hormone.
      
 0.935
ENSACLP00000033842
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
    
 
 0.891
LOC113030093
Uncharacterized protein.
    
 0.823
ENSACLP00000032378
Zinc finger and BTB domain containing 16a.
    
 0.796
LOC113020014
Cytochrome P450, family 19, subfamily A, polypeptide 1a; Belongs to the cytochrome P450 family.
      
 0.794
ENSACLP00000031863
SRY-box transcription factor 9a.
    
 0.789
LOC113020716
SRY-box transcription factor 9b.
    
 0.789
sycp3
Synaptonemal complex protein 3.
    
 0.784
ENSACLP00000017518
WD repeat domain 24.
    
 0.766
ENSACLP00000030400
Cytochrome P450, family 11, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
      
 0.758
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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