STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006599MCL1 apoptosis regulator, BCL2 family member b. (278 aa)    
Predicted Functional Partners:
bax
Uncharacterized protein.
    
 0.978
ENSACLP00000006475
Uncharacterized protein.
    
 0.978
becn1
Beclin 1, autophagy related.
    
 0.972
LOC113029596
Zgc:153993.
    
 
 0.956
ENSACLP00000006726
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
 
 0.952
pink1
PTEN induced kinase 1.
    
 0.895
bad
BCL2 associated agonist of cell death b.
   
 0.852
pgam5
PGAM family member 5, serine/threonine protein phosphatase, mitochondrial.
    
 0.845
bmf
Uncharacterized protein.
    
 0.825
LOC113008499
Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family.
    
 
 0.819
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.