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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023276Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b. (354 aa)    
Predicted Functional Partners:
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
 0.875
fzd4
Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.874
ENSACLP00000010737
Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family.
    
  0.869
ednrb
Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.
    
  0.869
LOC113033752
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
  0.869
ENSACLP00000010316
Frizzled class receptor 9b; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.867
fzd10
Frizzled class receptor 10; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.867
ENSACLP00000005129
Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.
    
  0.866
ENSACLP00000031693
Frizzled class receptor 5; Belongs to the G-protein coupled receptor Fz/Smo family.
    
  0.866
fzd6
Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.
    
  0.866
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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