STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tjap1Tight junction associated protein 1 (peripheral). (641 aa)    
Predicted Functional Partners:
ENSACLP00000028183
Discs, large homolog 3 (Drosophila); Belongs to the MAGUK family.
    
  0.841
ENSACLP00000028400
Si:dkey-31j3.11.
    
  0.841
dmap1
DNA methyltransferase 1 associated protein 1.
   
 0.841
ENSACLP00000005889
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.823
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.806
ENSACLP00000008692
AT rich interactive domain 4A (RBP1-like).
    
 0.803
ENSACLP00000034796
Translocase of outer mitochondrial membrane 20.
    
 0.803
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.793
mrgbp
MRG/MORF4L binding protein.
    
 0.785
polr2j
Polymerase (RNA) II (DNA directed) polypeptide J.
   
 0.785
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.