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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113029924Uncharacterized protein. (697 aa)    
Predicted Functional Partners:
stk39
Serine threonine kinase 39.
    
 
 0.413
LOC113010698
Oxidative stress responsive kinase 1a.
    
 
 0.413
strada
STE20 related adaptor alpha.
    
 
 0.413
STRADB
STE20 related adaptor beta.
    
 
 0.413
LOC113029050
Oxidative stress responsive kinase 1b.
    
 
 0.413
LOC113008878
Uncharacterized protein.
  
     0.412
ENSACLP00000003254
CBM21 domain-containing protein.
  
     0.407
ENSACLP00000032582
Uncharacterized protein.
  
     0.404
ENSACLP00000008695
Uncharacterized protein.
  
     0.401
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.