Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
ENSACLP00000006630Small integral membrane protein 13. (87 aa)    
Predicted Functional Partners:
hypk
Huntingtin interacting protein K.
   
 
 0.914
LOC113030212
N(alpha)-acetyltransferase 15, NatA auxiliary subunit a.
   
 
 0.873
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
   
 
 0.873
kat14
Lysine acetyltransferase 14.
   
 
 0.841
naa60
N-acetyltransferase 15 (GCN5-related, putative).
   
 
 0.841
naa50
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
   
 
 0.841
LOC113034576
Ribosomal protein L26.
   
   0.818
ENSACLP00000020299
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.808
rpl38
Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
   0.805
rpl4
Ribosomal protein L4.
   
 
 0.793
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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