Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022632Solute carrier family 11 member 2. (562 aa)    
Predicted Functional Partners:
SLC39A12
Solute carrier family 39 member 12.
  
 
 0.879
slc39a4
ZIP4_domain domain-containing protein.
  
 
 0.879
SLC39A11
Solute carrier family 39 member 11.
  
 
 0.876
slc39a10
Uncharacterized protein.
  
 
 0.873
slc39a6
Solute carrier family 39 member 6.
  
 
 0.873
slc39a13
Solute carrier family 39 member 13.
  
 
 0.870
SLC39A3
Solute carrier family 39 member 3.
     
 0.866
SLC39A1
Solute carrier family 39 member 1.
     
 0.866
LOC113019556
Solute carrier family 39 member 1.
     
 0.866
ENSACLP00000025245
Uncharacterized protein.
  
 
 0.852
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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