STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlc1Modulator of VRAC current 1. (405 aa)    
Predicted Functional Partners:
ntsr1
Neurotensin receptor 1 (high affinity); Belongs to the G-protein coupled receptor 1 family.
   
    0.696
znf704
Zinc finger protein 704.
      
 0.630
LOC113013125
Si:rp71-79p20.2.
      
 0.630
LOC113008191
Myosin, light chain 1, alkali; skeletal, fast.
      
 0.613
KCNJ10
Potassium voltage-gated channel subfamily J member 10.
    
   0.561
LOC113018947
Uncharacterized protein.
    
   0.561
KCNJ15
Potassium voltage-gated channel subfamily J member 15.
    
   0.561
tbxa2r
Thromboxane A2 receptor.
      
 0.538
ATE1
Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
      
 0.488
LURAP1L
Leucine rich adaptor protein 1 like.
      
 0.479
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.