STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006662BBX high mobility group box domain containing. (700 aa)    
Predicted Functional Partners:
atxn1l
Ataxin 1-like.
    
 
 0.643
LOC113032344
Ataxin 1b.
    
 
 0.643
atxn1
Ataxin 1a.
    
 
 0.643
ENSACLP00000026666
Uncharacterized protein.
    
 0.598
ENSACLP00000029092
Uncharacterized protein.
    
 0.598
ENSACLP00000025345
Inter-alpha-trypsin inhibitor heavy chain family member 6.
    
 0.588
ENSACLP00000018602
SIN3 transcription regulator family member Ab.
   
 
 0.568
haus5
SIN3 transcription regulator family member B.
   
 
 0.568
sin3a
SIN3 transcription regulator family member Aa.
   
 
 0.568
ENSACLP00000023915
TYRO3 protein tyrosine kinase.
    
 0.565
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.