Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ENSACLP00000006662BBX high mobility group box domain containing. (700 aa)    
Predicted Functional Partners:
gpatch4
G patch domain containing 4.
    
   0.834
LOC113018639
DEAH (Asp-Glu-Ala-His) box helicase 15.
    
   0.821
DHX15
DEAH-box helicase 15.
    
   0.821
LOC113034576
Ribosomal protein L26.
    
   0.775
LOC113013070
MBD domain-containing protein.
    
   0.755
lap3
Leucine aminopeptidase 3.
      
 0.713
ENSACLP00000017642
Butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1.
      
 0.709
atxn1l
Ataxin 1-like.
    
 
 0.654
LOC113032344
Ataxin 1b.
    
 
 0.654
atxn1
Ataxin 1a.
    
 
 0.654
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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