Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006670Histone H2A; Belongs to the histone H2A family. (131 aa)    
Predicted Functional Partners:
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.898
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.850
LOC113010915
Histone H2B; Belongs to the histone H2B family.
  
 0.842
ENSACLP00000023776
Histone H2B; Belongs to the histone H2B family.
  
 0.835
ENSACLP00000006709
Histone H2B; Belongs to the histone H2B family.
  
 0.833
ENSACLP00000018350
Histone H2B; Belongs to the histone H2B family.
  
 0.833
ENSACLP00000021612
Histone H2B; Belongs to the histone H2B family.
  
 0.833
LOC113008652
Histone H2B 1/2.
  
 0.833
ENSACLP00000039140
Histone H2B; Belongs to the histone H2B family.
  
 0.832
RPS27A
Ribosomal protein S27a.
   
 0.800
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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