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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006670Histone H2A; Belongs to the histone H2A family. (131 aa)    
Predicted Functional Partners:
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.995
LOC113030109
Lysine (K)-specific demethylase 6B, b.
    
 0.837
kdm6a
Lysine (K)-specific demethylase 6A.
    
 0.837
ENSACLP00000028690
Lysine (K)-specific demethylase 6B, a.
    
 0.837
LOC113015778
Lysine (K)-specific demethylase 6A, like.
    
 0.837
LOC113010915
Histone H2B; Belongs to the histone H2B family.
 
 0.830
ENSACLP00000023776
Histone H2B; Belongs to the histone H2B family.
 
 0.827
RPS27A
Ribosomal protein S27a.
   
  0.825
ENSACLP00000006709
Histone H2B; Belongs to the histone H2B family.
 
 0.825
ENSACLP00000018350
Histone H2B; Belongs to the histone H2B family.
 
 0.825
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.