STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ppp4cSerine/threonine-protein phosphatase. (311 aa)    
Predicted Functional Partners:
ppp4r3a
SMEK homolog 1, suppressor of mek1 (Dictyostelium).
   
 0.999
ppp4r2
Protein phosphatase 4, regulatory subunit 2b.
   
 0.999
ppp4r3b
Protein phosphatase 4, regulatory subunit 3B.
   
 0.998
ppp4r1
WRNPLPNID domain-containing protein.
    
 0.996
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 0.989
LOC113017428
Uncharacterized protein.
    
 0.989
tiprl
TIP41, TOR signaling pathway regulator-like (S. cerevisiae).
   
 
 0.984
ppp4r4
Protein phosphatase 4, regulatory subunit 4.
    
 0.983
LOC113036096
Protein phosphatase 2, regulatory subunit A, beta b.
   
 0.980
ccdc6
Coiled-coil domain containing 6a.
    
 
 0.975
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.