Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000006704Zgc:171929. (103 aa)    
Predicted Functional Partners:
ENSACLP00000009518
Succinate dehydrogenase complex assembly factor 1; Belongs to the complex I LYR family.
      
 0.673
nsun2
NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.637
ubr3
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.586
LOC113016818
High mobility group 20B.
    
 
 0.545
mrpl24
Mitochondrial ribosomal protein L24.
      
 0.512
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
    0.512
snx6
Sorting nexin; Involved in several stages of intracellular trafficking.
      
 0.508
snx5
Sorting nexin; Involved in several stages of intracellular trafficking.
      
 0.508
PRADC1
Protease associated domain containing 1.
      
 0.499
ENSACLP00000005197
Uncharacterized protein.
      
 0.495
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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