Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GHITMGrowth hormone inducible transmembrane protein; Belongs to the BI1 family. (348 aa)    
Predicted Functional Partners:
tmbim6
Testis enhanced gene transcript (BAX inhibitor 1); Belongs to the BI1 family.
   
  
 0.752
clrn3
Clarin 3.
      
 0.721
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
      
 0.721
sdha
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
    0.716
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
      
 0.704
LOC113028568
Ubiquinol-cytochrome c reductase core protein 2b.
   
    0.702
ENSACLP00000041400
Ubiquinol-cytochrome c reductase core protein 2a.
   
    0.702
ndufb11
NADH:ubiquinone oxidoreductase subunit B11.
   
    0.700
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
   
    0.689
gdap1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.677
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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