STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023981Protein kinase N1a. (946 aa)    
Predicted Functional Partners:
ENSACLP00000012848
Uncharacterized protein.
    
 0.930
LOC113012818
Uncharacterized protein.
    
 0.925
LOC113013171
Uncharacterized protein.
    
 0.925
LOC113022452
Ras homolog gene family, member Ab.
    
 0.925
LOC113022007
Ras homolog family member Cb.
    
 0.925
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
0.903
pkn2
Protein kinase N2.
  
  
 
0.828
ENSACLP00000001964
Protein kinase N1b.
  
  
 
0.816
LOC113012962
Uncharacterized protein.
    
 0.806
RHOB
Ras homolog family member B.
    
 0.806
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.