STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023981Protein kinase N1a. (946 aa)    
Predicted Functional Partners:
ENSACLP00000012848
Uncharacterized protein.
    
 0.940
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
 0.924
LOC113012818
Uncharacterized protein.
    
 0.891
LOC113012962
Uncharacterized protein.
    
 0.891
LOC113013171
Uncharacterized protein.
    
 0.891
LOC113022452
Ras homolog gene family, member Ab.
    
 0.891
LOC113022007
Ras homolog family member Cb.
    
 0.891
RHOB
Ras homolog family member B.
    
 0.891
pkn2
Protein kinase N2.
     
  0.871
ENSACLP00000018362
Serine/threonine-protein kinase TOR.
    
 0.848
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.