Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113023509Uncharacterized protein. (536 aa)    
Predicted Functional Partners:
ENSACLP00000023325
Coiled-coil domain containing 114.
  
 
 0.936
ENSACLP00000016170
Armadillo repeat containing 4.
    
 
 0.930
ccdc40
Coiled-coil domain containing 40.
    
 0.928
ttc25
Tetratricopeptide repeat domain 25.
  
 
 0.920
ccdc39
Uncharacterized protein.
    
 0.901
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
    
 
 0.900
ift74
Intraflagellar transport 74.
    
  0.889
commd8
COMM domain containing 8.
    
  0.885
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.878
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.874
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.