Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ucmaUpper zone of growth plate and cartilage matrix associated a. (132 aa)    
Predicted Functional Partners:
ggcx
Gamma-glutamyl carboxylase.
      
 0.655
ENSACLP00000014013
EF-hand calcium binding domain 2.
      
 0.644
sergef
Secretion regulating guanine nucleotide exchange factor.
      
 0.639
hace1
HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1.
      
 0.610
ENSACLP00000005618
Usher syndrome 1C.
      
 0.608
tmem244
Transmembrane protein 244.
      
 0.586
ENSACLP00000015666
Fin bud initiation factor a.
      
 0.506
ENSACLP00000017462
Fin bud initiation factor b.
      
 0.506
LOC113009715
Tetraspanin.
      
 0.485
ano9
Anoctamin.
      
 0.484
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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