Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
clppATP-dependent Clp protease proteolytic subunit. (271 aa)    
Predicted Functional Partners:
clpx
Caseinolytic mitochondrial matrix peptidase chaperone subunit b.
 
 0.999
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.982
ssbp1
Single-stranded DNA binding protein 1.
  
 0.960
tfam
Transcription factor A, mitochondrial.
    
 0.958
LOC113007291
Heat shock 10 protein 1; Belongs to the GroES chaperonin family.
 
 
 0.954
aco2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.950
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 0.943
acadm
Acyl-CoA dehydrogenase medium chain.
    
 0.941
ndufs7
NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.
  
 
 0.938
hspd1
Heat shock 60 protein 1; Belongs to the chaperonin (HSP60) family.
 
 0.935
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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