Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006791Uncharacterized protein. (200 aa)    
Predicted Functional Partners:
mrps22
Mitochondrial ribosomal protein S22.
   
 0.988
ENSACLP00000021211
Mitochondrial ribosomal protein S31.
   
 0.986
dap3
Death associated protein 3.
   
 0.986
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.985
ENSACLP00000038524
Mitochondrial ribosomal protein S6.
   
 0.985
mrps14
Mitochondrial ribosomal protein S14.
   
 0.982
ENSACLP00000015460
Mitochondrial ribosomal protein S18C.
   
 0.981
mrps33
Mitochondrial ribosomal protein S33.
   
 0.981
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 0.981
mrps16
Mitochondrial ribosomal protein S16.
   
 0.980
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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