STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phyhPhytanoyl-CoA 2-hydroxylase. (334 aa)    
Predicted Functional Partners:
pex7
Peroxisomal biogenesis factor 7.
    
 0.877
ENSACLP00000041412
Phytanoyl-CoA dioxygenase domain containing 1.
   
 
0.868
LOC113023789
Phosphate cytidylyltransferase 2, ethanolamine.
    
  0.827
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
    
  0.827
acaa1
Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.808
agps
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
  
 0.790
pex14
Peroxisomal biogenesis factor 14.
    
 0.752
pex10
Peroxisomal biogenesis factor 10.
   
 
 0.736
LOC113015954
Serine--pyruvate aminotransferase.
    
 0.732
LOC113009972
Serine--pyruvate aminotransferase.
    
 0.732
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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