Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cplx4Complexin 4a. (159 aa)    
Predicted Functional Partners:
CPLX1
Complexin 1.
     
 0.953
cplx2
Complexin 2.
     
  0.938
cplx3
Complexin 3b.
  
  
 
0.938
LOC113023916
Complexin 2, like.
     
  0.904
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
     
 0.721
LOC113026071
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
     
 0.721
ENSACLP00000001140
Uncharacterized protein.
      
 0.664
LOC113007016
Uncharacterized protein.
      
 0.640
ENSACLP00000018565
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
     
 0.636
mapk4
Mitogen-activated protein kinase 4.
    
 
 0.636
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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