STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cplx4Complexin 4a. (159 aa)    
Predicted Functional Partners:
CPLX1
Complexin 1.
     
 0.861
pdc
Phosducin b.
   
    0.857
cplx3
Complexin 3b.
  
  
 
0.848
LOC113035354
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
    0.820
ina
Internexin neuronal intermediate filament protein, alpha b; Belongs to the intermediate filament family.
   
    0.743
LOC113011028
Phosducin domain-containing protein.
   
    0.653
mapk4
Mitogen-activated protein kinase 4.
    
 
 0.510
emp2
Epithelial membrane protein 2.
  
   
 0.494
ENSACLP00000008539
Uncharacterized protein.
      
 0.448
RIMS2
Regulating synaptic membrane exocytosis 2.
      
 0.448
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.