GPM6A protein (Astatotilapia calliptera) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

GPM6A

Glycoprotein M6Ab. (278 aa)

Predicted Functional Partners:

LOC113032357

0.645

mbp

0.645

fitm2

0.640

LOC113012460

0.605

LOC113007012

0.605

hacd4

0.602

ENSACLP00000014325

0.601

ENSACLP00000021035

0.601

ENSACLP00000028450

0.601

ENSACLP00000033071

0.601

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000014325	GPM6A	ENSACLP00000014325	ENSACLP00000006829	Uncharacterized protein.	Glycoprotein M6Ab.	0.601
ENSACLP00000014325	mbp	ENSACLP00000014325	ENSACLP00000032943	Uncharacterized protein.	Myelin basic protein b.	0.586
ENSACLP00000021035	GPM6A	ENSACLP00000021035	ENSACLP00000006829	Microtubule-associated protein.	Glycoprotein M6Ab.	0.601
ENSACLP00000021035	mbp	ENSACLP00000021035	ENSACLP00000032943	Microtubule-associated protein.	Myelin basic protein b.	0.586
ENSACLP00000028450	GPM6A	ENSACLP00000028450	ENSACLP00000006829	Microtubule-associated protein.	Glycoprotein M6Ab.	0.601
ENSACLP00000028450	mbp	ENSACLP00000028450	ENSACLP00000032943	Microtubule-associated protein.	Myelin basic protein b.	0.586
ENSACLP00000033071	GPM6A	ENSACLP00000033071	ENSACLP00000006829	Microtubule-associated protein.	Glycoprotein M6Ab.	0.601
ENSACLP00000033071	mbp	ENSACLP00000033071	ENSACLP00000032943	Microtubule-associated protein.	Myelin basic protein b.	0.586
GPM6A	ENSACLP00000014325	ENSACLP00000006829	ENSACLP00000014325	Glycoprotein M6Ab.	Uncharacterized protein.	0.601
GPM6A	ENSACLP00000021035	ENSACLP00000006829	ENSACLP00000021035	Glycoprotein M6Ab.	Microtubule-associated protein.	0.601
GPM6A	ENSACLP00000028450	ENSACLP00000006829	ENSACLP00000028450	Glycoprotein M6Ab.	Microtubule-associated protein.	0.601
GPM6A	ENSACLP00000033071	ENSACLP00000006829	ENSACLP00000033071	Glycoprotein M6Ab.	Microtubule-associated protein.	0.601
GPM6A	LOC113007012	ENSACLP00000006829	ENSACLP00000011403	Glycoprotein M6Ab.	Visinin-like 1a.	0.605
GPM6A	LOC113012460	ENSACLP00000006829	ENSACLP00000004705	Glycoprotein M6Ab.	Visinin-like 1b.	0.605
GPM6A	LOC113032357	ENSACLP00000006829	ENSACLP00000032915	Glycoprotein M6Ab.	Uncharacterized protein.	0.645
GPM6A	fitm2	ENSACLP00000006829	ENSACLP00000024496	Glycoprotein M6Ab.	Fat storage inducing transmembrane protein 2.	0.640
GPM6A	hacd4	ENSACLP00000006829	ENSACLP00000011628	Glycoprotein M6Ab.	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]	0.602
GPM6A	mbp	ENSACLP00000006829	ENSACLP00000032943	Glycoprotein M6Ab.	Myelin basic protein b.	0.645
LOC113007012	GPM6A	ENSACLP00000011403	ENSACLP00000006829	Visinin-like 1a.	Glycoprotein M6Ab.	0.605
LOC113012460	GPM6A	ENSACLP00000004705	ENSACLP00000006829	Visinin-like 1b.	Glycoprotein M6Ab.	0.605