Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slitrk3SLIT and NTRK-like family, member 3a. (904 aa)    
Predicted Functional Partners:
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.914
PTPRD-2
Uncharacterized protein.
    
 0.914
LOC113011806
SLIT and NTRK-like family, member 3b.
     
  0.872
SLITRK1
SLIT and NTRK like family member 1.
   
 
  0.869
slitrk6
SLIT and NTRK-like family, member 6.
   
 
  0.868
ENSACLP00000028392
SLIT and NTRK-like family, member 4.
   
 
  0.862
ENSACLP00000004864
Protein tyrosine phosphatase receptor type Fa.
    
 0.808
LOC113011369
Protein tyrosine phosphatase receptor type Sa.
    
 0.808
ENSACLP00000014579
Protein tyrosine phosphatase receptor type Fb.
    
 0.808
ENSACLP00000034346
Uncharacterized protein.
    
 0.808
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.