STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006853Rho-GAP domain-containing protein. (1141 aa)    
Predicted Functional Partners:
LOC113022989
Cell division cycle 42.
    
 0.796
rictor
RPTOR independent companion of MTOR, complex 2 a.
    
 0.716
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.636
ENSACLP00000012866
Uncharacterized protein.
    
 0.581
ENSACLP00000012873
SH3 domain-containing protein.
    
 0.581
ENSACLP00000014175
Intersectin 2b.
    
 0.581
ENSACLP00000000836
Intersectin 1 (SH3 domain protein).
    
 0.573
ENSACLP00000001080
Uncharacterized protein.
    
 0.573
ENSACLP00000012953
EH domain-containing protein.
    
 0.573
LOC113026930
Proline rich 5a (renal).
     
  0.571
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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