Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
fbxl15F-box and leucine-rich repeat protein 15. (292 aa)    
Predicted Functional Partners:
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.990
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.975
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.931
arih1
RBR-type E3 ubiquitin transferase.
    
   0.923
LOC113027085
Cryptochrome circadian regulator 1b.
    
 0.889
LOC113013797
Cryptochrome circadian regulator 3a.
    
 0.889
LOC113024895
Cryptochrome circadian regulator 5.
    
 0.889
LOC113008741
Cryptochrome circadian regulator 1a.
    
 0.889
LOC113026284
Cryptochrome circadian regulator 2.
    
 0.889
LOC113026866
Si:ch1073-390k14.1.
    
 0.889
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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