STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008591Cyclin-dependent kinase 17. (548 aa)    
Predicted Functional Partners:
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 0.912
cdc25b
Rhodanese domain-containing protein.
   
 0.898
orc2
Uncharacterized protein.
 
 
 0.886
LOC113035402
Cyclin B2; Belongs to the cyclin family.
   
 0.870
ccna1
Cyclin A1; Belongs to the cyclin family.
   
 0.870
LOC113031225
Cyclin A2; Belongs to the cyclin family.
   
 0.870
ccnb3
Cyclin B3; Belongs to the cyclin family.
   
 0.870
cntd2
Cyclin N-terminal domain containing 2; Belongs to the cyclin family.
   
 0.870
wdr41
WD repeat domain 41.
   
 0.870
ccnb1
Cyclin B1; Belongs to the cyclin family.
   
 0.870
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.