STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000006895Rho-GAP domain-containing protein. (67 aa)    
Predicted Functional Partners:
ENSACLP00000012866
Uncharacterized protein.
    
 0.741
ENSACLP00000012873
SH3 domain-containing protein.
    
 0.741
ENSACLP00000014175
Intersectin 2b.
    
 0.741
rictor
RPTOR independent companion of MTOR, complex 2 a.
    
 0.653
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.649
mapkap1
MAPK associated protein 1.
    
 0.641
ENSACLP00000000836
Intersectin 1 (SH3 domain protein).
    
 0.640
ENSACLP00000001080
Uncharacterized protein.
    
 0.640
ENSACLP00000012953
EH domain-containing protein.
    
 0.640
LOC113022989
Cell division cycle 42.
    
 0.585
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.