STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlgn3Neuroligin 3a. (857 aa)    
Predicted Functional Partners:
LOC113028267
Neurexin 1.
    
 0.935
nrxn1
Neurexin 1.
    
 0.930
ENSACLP00000007945
Uncharacterized protein.
    
 0.923
LOC113037115
Neurexin 3b.
    
 0.923
NRXN2
Neurexin 2.
    
 0.886
LOC113031125
Uncharacterized protein.
    
 0.886
LOC113030206
Malate synthase-like.
  
 
  0.818
LOC113031405
Cytochrome b5 reductase 4.
    
 0.814
ENSACLP00000011936
UTP20 small subunit processome component.
   
  0.669
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2.
    
 
 0.660
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.