STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd2aMajor facilitator superfamily domain containing 2ab. (527 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
    
  0.797
tk1
Thymidine kinase.
    
  0.784
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
  0.746
LOC113014802
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.680
LOC113031862
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.680
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.680
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
  0.603
LOC113030691
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.595
LOC113035946
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.595
ENSACLP00000004604
Nucleoside diphosphate kinase.
    
  0.581
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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