STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem161aTransmembrane protein 161A. (496 aa)    
Predicted Functional Partners:
klhl31
Kelch-like family member 31.
      
 0.577
tmem38a
Transmembrane protein 38A.
      
 0.538
tmem94
Transmembrane protein 94.
      
 0.533
ENSACLP00000007775
Nuclear factor of activated T cells 4.
      
 0.482
ENSACLP00000010605
DNA polymerase.
      
 0.469
tmem214
Transmembrane protein 214.
      
 0.465
rhbdd1
Rhomboid domain containing 1.
      
 0.456
cdc25b
Rhodanese domain-containing protein.
      
 0.422
popdc3
Popeye domain containing 3.
      
 0.403
popdc2
Popeye domain containing 2.
      
 0.403
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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