Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022142Zgc:153675. (128 aa)    
Predicted Functional Partners:
ENSACLP00000012232
F-box protein 7.
    
 
 0.680
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.671
prdm4
PR domain containing 4.
      
 0.661
mgat4c
Mgat4 family member C.
      
 0.655
ENSACLP00000025969
Transmembrane protein 251.
      
 0.610
ints12
Integrator complex subunit 12.
      
 0.546
ENSACLP00000039767
Cytosolic iron-sulfur assembly component 2B.
      
 0.529
get4
Guided entry of tail-anchored proteins factor 4.
      
 0.491
LOC113026357
Uncharacterized protein.
      
 0.489
nxph2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
     0.470
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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