Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ENSACLP00000006981Carnitine deficiency-associated gene expressed in ventricle 3. (228 aa)    
Predicted Functional Partners:
pa2g4
Proliferation-associated 2G4, b.
   
  
 0.740
rnf7
Ring finger protein 7.
      
 0.670
tfdp1
Transcription factor.
      
 0.617
ENSACLP00000027936
Uncharacterized protein.
      
 0.588
ENSACLP00000020295
Small EDRK-rich factor 2.
      
 0.546
dap
Death-associated protein.
      
 0.527
LOC113015686
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.483
tmem108
Transmembrane protein 108.
      
 0.467
ENSACLP00000005363
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.466
pccb
Propionyl-CoA carboxylase subunit beta.
      
 0.466
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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