Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022652Uncharacterized protein. (218 aa)    
Predicted Functional Partners:
ENSACLP00000024569
Transient receptor potential cation channel, subfamily M, member 2.
     
  0.717
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
     
 0.717
mib2
Mindbomb E3 ubiquitin protein ligase 2.
     
  0.621
ENSACLP00000018602
SIN3 transcription regulator family member Ab.
    
 0.564
haus5
SIN3 transcription regulator family member B.
    
 0.564
sin3a
SIN3 transcription regulator family member Aa.
    
 0.564
optn
Optineurin.
    
 0.562
LOC113013036
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.562
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.521
LOC113034514
Protein kinase domain-containing protein.
    
 0.521
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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