STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022652Uncharacterized protein. (218 aa)    
Predicted Functional Partners:
ENSACLP00000018602
SIN3 transcription regulator family member Ab.
    
 0.660
haus5
SIN3 transcription regulator family member B.
    
 0.660
sin3a
SIN3 transcription regulator family member Aa.
    
 0.660
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.645
optn
Optineurin.
   
 0.642
LOC113013036
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.642
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.636
LOC113034514
Protein kinase domain-containing protein.
    
 0.636
tbk1
TANK-binding kinase 1.
    
 0.636
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.636
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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