Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113010544Nectin cell adhesion molecule 4b. (572 aa)    
Predicted Functional Partners:
nectin1
Nectin cell adhesion molecule 1b.
    
 0.982
ENSACLP00000001671
Afadin, adherens junction formation factor a.
    
 0.928
ENSACLP00000003584
Uncharacterized protein.
    
 0.928
LOC113036070
Uncharacterized protein.
    
  0.884
LOC113030735
Nectin cell adhesion molecule 3b.
    
  0.884
LOC113014137
PVR cell adhesion molecule related 2 like.
    
  0.878
LOC113032396
Si:ch73-22o12.1.
    
  0.878
LOC113011389
Par-3 family cell polarity regulator alpha, b.
    
  0.877
PARD3
Par-3 family cell polarity regulator.
    
  0.877
eif2b1
Eukaryotic translation initiation factor 2B, subunit 1 alpha; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.874
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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