STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113035203Proteolipid protein 1a. (274 aa)    
Predicted Functional Partners:
mbp
Myelin basic protein b.
   
 
 0.787
LOC113032357
Uncharacterized protein.
   
 
 0.544
sox10
SRY-box transcription factor 10.
   
  
 0.469
mpz
Myelin protein zero.
   
  
 0.446
ptprn2
Protein tyrosine phosphatase receptor type N2.
    
   0.418
LOC113010403
Uncharacterized protein.
    
   0.418
ENSACLP00000018372
Uncharacterized protein.
    
   0.418
LOC113008109
Protein tyrosine phosphatase receptor type Na.
    
   0.418
ENSACLP00000020649
S100 calcium binding protein, beta (neural); Belongs to the S-100 family.
   
  
 0.413
cnp
2',3'-cyclic nucleotide 3' phosphodiesterase.
   
  
 0.409
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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