LOC113035203 protein (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC113035203

Proteolipid protein 1a. (274 aa)

Predicted Functional Partners:

mbp

0.984

ENSACLP00000001071

0.804

LOC113017402

0.804

ENSACLP00000034216

0.804

ENSACLP00000021832

0.760

ptprn2

0.729

LOC113010403

0.729

ENSACLP00000018372

0.729

LOC113008109

0.729

ENSACLP00000020649

0.710

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000001071	ENSACLP00000021832	ENSACLP00000001071	ENSACLP00000021832	Amino acid transporter.	Huntingtin.	0.686
ENSACLP00000001071	LOC113035203	ENSACLP00000001071	ENSACLP00000007051	Amino acid transporter.	Proteolipid protein 1a.	0.804
ENSACLP00000018372	LOC113035203	ENSACLP00000018372	ENSACLP00000007051	Uncharacterized protein.	Proteolipid protein 1a.	0.729
ENSACLP00000020649	LOC113035203	ENSACLP00000020649	ENSACLP00000007051	S100 calcium binding protein, beta (neural); Belongs to the S-100 family.	Proteolipid protein 1a.	0.710
ENSACLP00000020649	mbp	ENSACLP00000020649	ENSACLP00000032943	S100 calcium binding protein, beta (neural); Belongs to the S-100 family.	Myelin basic protein b.	0.655
ENSACLP00000021832	ENSACLP00000001071	ENSACLP00000021832	ENSACLP00000001071	Huntingtin.	Amino acid transporter.	0.686
ENSACLP00000021832	ENSACLP00000034216	ENSACLP00000021832	ENSACLP00000034216	Huntingtin.	Amino acid transporter.	0.686
ENSACLP00000021832	LOC113017402	ENSACLP00000021832	ENSACLP00000016078	Huntingtin.	Amino acid transporter.	0.686
ENSACLP00000021832	LOC113035203	ENSACLP00000021832	ENSACLP00000007051	Huntingtin.	Proteolipid protein 1a.	0.760
ENSACLP00000034216	ENSACLP00000021832	ENSACLP00000034216	ENSACLP00000021832	Amino acid transporter.	Huntingtin.	0.686
ENSACLP00000034216	LOC113035203	ENSACLP00000034216	ENSACLP00000007051	Amino acid transporter.	Proteolipid protein 1a.	0.804
LOC113008109	LOC113035203	ENSACLP00000026443	ENSACLP00000007051	Protein tyrosine phosphatase receptor type Na.	Proteolipid protein 1a.	0.729
LOC113010403	LOC113035203	ENSACLP00000000771	ENSACLP00000007051	Uncharacterized protein.	Proteolipid protein 1a.	0.729
LOC113017402	ENSACLP00000021832	ENSACLP00000016078	ENSACLP00000021832	Amino acid transporter.	Huntingtin.	0.686
LOC113017402	LOC113035203	ENSACLP00000016078	ENSACLP00000007051	Amino acid transporter.	Proteolipid protein 1a.	0.804
LOC113035203	ENSACLP00000001071	ENSACLP00000007051	ENSACLP00000001071	Proteolipid protein 1a.	Amino acid transporter.	0.804
LOC113035203	ENSACLP00000018372	ENSACLP00000007051	ENSACLP00000018372	Proteolipid protein 1a.	Uncharacterized protein.	0.729
LOC113035203	ENSACLP00000020649	ENSACLP00000007051	ENSACLP00000020649	Proteolipid protein 1a.	S100 calcium binding protein, beta (neural); Belongs to the S-100 family.	0.710
LOC113035203	ENSACLP00000021832	ENSACLP00000007051	ENSACLP00000021832	Proteolipid protein 1a.	Huntingtin.	0.760
LOC113035203	ENSACLP00000034216	ENSACLP00000007051	ENSACLP00000034216	Proteolipid protein 1a.	Amino acid transporter.	0.804