STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007052DnaJ (Hsp40) homolog, subfamily C, member 14. (675 aa)    
Predicted Functional Partners:
LOC113021917
Immunoglobulin superfamily, member 8.
    
   0.951
sarnp
SAP domain containing ribonucleoprotein.
    
 
 0.917
dnajc28
DnaJ (Hsp40) homolog, subfamily C, member 28.
      
 0.664
ENSACLP00000041514
Fumarylacetoacetate hydrolase domain containing 1.
      
 0.655
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
      
 0.646
tmub2
Transmembrane and ubiquitin-like domain containing 2.
      
 0.644
dnajc4
DnaJ (Hsp40) homolog, subfamily C, member 4.
      
 0.642
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
      
 0.637
dnajc9
DnaJ (Hsp40) homolog, subfamily C, member 9.
      
 0.612
nrde2
NRDE-2, necessary for RNA interference, domain containing.
      
 0.612
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.