Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007060Myocyte enhancer factor 2b. (432 aa)    
Predicted Functional Partners:
cabin1
Calcineurin binding protein 1.
    
 
 0.986
mef2d
Myocyte enhancer factor 2d.
    
 0.980
MEF2D
Myocyte enhancer factor 2D.
    
 0.980
mef2c
Myocyte enhancer factor 2cb.
    
 0.977
LOC113026412
MADS-box domain-containing protein.
    
 0.973
mef2a
Myocyte enhancer factor 2aa.
    
 0.973
nkx2-5
NK2 homeobox 5.
    
 0.972
nfatc2
Nuclear factor of activated T cells 2a.
    
 0.919
ENSACLP00000007775
Nuclear factor of activated T cells 4.
     
 0.903
LOC113012864
Mitogen-activated protein kinase.
    
 0.884
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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